Genome Size Estimation Service

Flow cytometry-based genome size estimations for insect samples. Available to external collaborators on a per-species fee basis.

Insects Flow Cytometry External Collaborations Welcome

How It Works

Before sending samples, please read through the following requirements carefully. Estimations will only be initiated after direct contact and agreement on rates.

1
Contact us first

Estimations are only run after you have contacted Dr. Hjelmen, discussed your samples, and agreed upon a rate. Please reach out before sending anything.

2
Per-species pricing

Estimations are charged at a per-species rate, billed upon completion. Rates are determined during initial contact.

3
No ethanol-preserved samples

Flow cytometry requires intact nuclei. Ethanol-fixed samples are not compatible with this method and cannot be processed.

4
Samples must be alive or flash-frozen

Live samples or samples that were flash-frozen immediately upon collection are required for successful estimations.

5
Ship frozen samples on dry ice

Frozen samples must be shipped on dry ice to ensure they remain frozen during transit. Ice packs are not sufficient.

6
Recommended: ≥5 males and ≥5 females per species

Best results come from running at least five individuals of each sex. Smaller numbers can be accommodated but may affect reliability.

More individuals per sex is always better — degraded samples, standard overlap, or other technical issues can reduce effective sample size.

7
Send extra samples when possible

Sending more than five individuals of each sex provides backup in case of DNA degradation or issues with the internal size standard (e.g., overlapping peak size, standard degradation).

8
Turnaround time

Estimations are run between teaching and other lab responsibilities. In most cases turnaround is relatively quick, but timelines are discussed at the time of agreement.

Technical issues do occur — standard species used for calibration can occasionally have overlapping peak sizes or degradation issues. Higher sample numbers help mitigate this risk.

What is Flow Cytometry?

Flow cytometry is used to estimate genome size by measuring the relative fluorescence of nuclei stained with a DNA-binding dye (typically propidium iodide). The fluorescence of sample nuclei is compared to that of a standard species with a known genome size, allowing estimation of the sample's genome size in MbDNA of DNA.

Sample Checklist

  • Prior contact and rate agreement
  • Insects only (contact us about other arthropods)
  • Live or flash-frozen — no ethanol
  • Shipped on dry ice if frozen
  • ≥5 males and ≥5 females per species (more is better)
  • Clearly labeled with species, sex, and date collected

What You Receive

  • Genome size estimates (MbDNA) per individual
  • Separate estimates by sex where applicable
  • Summary statistics across individuals
  • Communication about any technical issues encountered

Relevant Publications

Interested in Getting an Estimation?

Contact Dr. Hjelmen to discuss your samples, confirm compatibility, and agree on a rate before sending anything. Questions about sample preparation or shipping are always welcome.

Carl.Hjelmen@uvu.edu