How It Works
Before sending samples, please read through the following requirements carefully. Estimations will only be initiated after direct contact and agreement on rates.
Estimations are only run after you have contacted Dr. Hjelmen, discussed your samples, and agreed upon a rate. Please reach out before sending anything.
Estimations are charged at a per-species rate, billed upon completion. Rates are determined during initial contact.
Flow cytometry requires intact nuclei. Ethanol-fixed samples are not compatible with this method and cannot be processed.
Live samples or samples that were flash-frozen immediately upon collection are required for successful estimations.
Frozen samples must be shipped on dry ice to ensure they remain frozen during transit. Ice packs are not sufficient.
Best results come from running at least five individuals of each sex. Smaller numbers can be accommodated but may affect reliability.
More individuals per sex is always better — degraded samples, standard overlap, or other technical issues can reduce effective sample size.
Sending more than five individuals of each sex provides backup in case of DNA degradation or issues with the internal size standard (e.g., overlapping peak size, standard degradation).
Estimations are run between teaching and other lab responsibilities. In most cases turnaround is relatively quick, but timelines are discussed at the time of agreement.
What is Flow Cytometry?
Flow cytometry is used to estimate genome size by measuring the relative fluorescence of nuclei stained with a DNA-binding dye (typically propidium iodide). The fluorescence of sample nuclei is compared to that of a standard species with a known genome size, allowing estimation of the sample's genome size in MbDNA of DNA.
Sample Checklist
- Prior contact and rate agreement
- Insects only (contact us about other arthropods)
- Live or flash-frozen — no ethanol
- Shipped on dry ice if frozen
- ≥5 males and ≥5 females per species (more is better)
- Clearly labeled with species, sex, and date collected
What You Receive
- Genome size estimates (MbDNA) per individual
- Separate estimates by sex where applicable
- Summary statistics across individuals
- Communication about any technical issues encountered
Relevant Publications
- Hjelmen et al. 2018 — Genome size evolution within and between the sexes. J. Heredity
- Hjelmen et al. 2019 — Genome size evolution in Drosophila subgenera. G3
- Johnston, Bernardini & Hjelmen 2018 — Genome size estimation and quantitative cytogenetics in insects. Methods Protocol
- Hjelmen 2024 — Genome size as a metric for genome assembly assessment. Genetics
Interested in Getting an Estimation?
Contact Dr. Hjelmen to discuss your samples, confirm compatibility, and agree on a rate before sending anything. Questions about sample preparation or shipping are always welcome.
Carl.Hjelmen@uvu.edu